Tuesday, October 13, 2009


There are a ton of studies obliquely referenced in this paper -- mostly riffing off interesting facts I've picked up, or cool ideas floating around the pointy-head-osphere. Here's a sampling of some of the key papers, in case you're interested.


•Bedair, M.F. and R.D. Oleschuk, Fabrication of porous polymer monoliths in polymeric microfluidic chips as an electrospray emitter for direct coupling to mass spectrometry. Anal Chem, 2006. 78(4): p. 1130-1138.

•Camilli, A. and B.L. Bassler, Bacterial small-molecule signaling pathways. Science, 2006. 311(5764): p. 1113-1116.

•Cantero, L., J.M. Palacios, and T. Ruiz-Arg├╝eso, Proteomic analysis of quorum sensing in Rhizobium leguminosarum biovar viciae UPM791. Proteomics, 2006. 6: p. S97-S106.

•Harris, T.D., et al., Single-molecule DNA sequencing of a viral genome. Science, 2008. 320(5872): p. 106-109.

•Keller, M. and R. Hettich, Environmental Proteomics: a Paradigm Shift in Characterizing Microbial Activities at the Molecular Level. Microbiol Mol Biol R, 2009. 73(1): p. 62-70.

•Lipson, D., et al., Quantification of the yeast transcriptome by single-molecule sequencing. Nat Biotech, 2009. 27: p. 652-658.

•Mardis, E.R., The impact of next-generation sequencing technology on genetics. Trends in Genetics, 2008. 24(3): p. 133-141.

•Naik, A.K., et al., Towards single-molecule nanomechanical mass spectrometry. Nat Nanotechnol, 2009. 4(7): p. 445-450.

•Schuster, M., et al., Identification, timing, and signal specificity of Pseudomonas aeruginosa quorum-controlled …. J Bacteriology, 2003. 185(7): p. 2066-2079.

•Sommer, M.O.A, D. Gautam, and G.M. Church. Functional Characterization of the Antibiotic Resistance Reservoir in the Human Microflora. Science, 2009. 325(5944): p. 1128-1131.

•Thompson, M.R., et al., Experimental Approach for Deep Proteome Measurements from Small-Scale Microbial Biomass Samples. Anal Chem, 2008. 80(24): p. 9517-9525.

•Waters, C.M. and B.L. Bassler, Quorum sensing: Cell-to-cell communication in bacteria. Annu Rev Cell Dev Bi, 2005. 21: p. 319-346.

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