Sunday, November 4, 2007

Rangitoto

Well, now that we're over all that testing unpleasantness, I can get on with an enjoyable vacation!

Good strides made on that front yesterday, when the Rainey family and I went out for a day hike up and around Rangitoto. This whipper-snapper of an island appeared suddenly about 600 years ago in a fit of fiery, explosive eruptions. This was all witnessed from the neighboring island of Motutapu, a much older cindercone that was home to a group of recently-immigrated Maori.

Can you imagine? "Oh, man, am I glad to be done with that canoe trip over hundreds of miles of treacherous ocean and back on the solid, unchanging land. Wait, what's that sound?"

Once things quieted down, there was a 6km island of black basaltic rock where before there was only water. It must have been quite a contrast to the fertile green Motutapu! Probably not much to recommend it for a weekend hike back then. But before long lichen began breaking down the rock, and soon after came the indomitable pohutukawa trees. It took a while -- drawings of the crater from the mid 1860s show it barren but for a couple scraggly trees -- but now virtually the whole island is covered in vegetation.

Looking out from Rangitoto, you can see many of the 50 or so other volcanic islands and peninsulas that mottle the gulf. This would be an incredible place to have a kayak. Imagine putting out a few blocks from home and having a good day's paddle out to an island camping spot! *major selling point* What a bummer that PhD's here only take three years...

One more day then until Meg makes it out here and we go off for some real adventuring. I can't wait!

Saturday, November 3, 2007

Ugh

Not much to report today. I took the GRE Biology subject test -- three hours of grueling, frequently tediously obscure questions. I'm beat.

Thursday, November 1, 2007

Hope

Take a look a this picture.That is a reconstructed moa. Moas were the tallest birds ever to have walked the Earth -- and they were kicking about New Zealand until at least 400 years ago. There are even a handful of intact moa eggs still extant, even though their shells are much thinner that those of the related ostrich.

Though the tallest birds ever (as far as we know), moas weren't the heaviest -- that honor goes to crazy 'terror birds' of South America, which probably grew to over 350 pounds and made a living hunting hapless South American mammals before the closing of the Isthmus of Panama allowed big mammalian predators to move down from South America. Still, the moas are totally incredible to behold. They are the most vivid representatives of how evolution works with what it has to fill ecological niches with the materials at hand: in the absence of mammals, birds in New Zealand diverged to an incredible degree. Moas even had predators in the form of ginormous, Tolkeinesque eagles.

So what happened? Same thing that happened to the terror birds of South America: mammals showed up. You see, birds had a leg (or wing) up over mammals when it came to these large islands: they, or their ancestors, could fly. This fact allowed birds to get to big, detached landmasses like New Zealand and ancient South America long before mammals could, and when they had enough habitat to support gigantic inhabitants, some of those birds became giant. But evolution works with what it has; it doesn't craft organisms according to some sort of ideal. That means that some of the very adaptations that allowed the moa's ancestors to make it to New Zealand in the first place, like delicate bone structure, presence of wings instead of grasping forearms, and weight-saving absence of true teeth, hampered the moa's ability to compete with mammals when they finally did show up. Of course, it didn't help that the moas were competing with the most devastatingly successful mammal ever: us.

Archaeological and cultural evidence suggests that the ancestors of New Zealand's native Maori people first came to the islands around 1000 years ago. Around 600 years later, the last of the six or so species of moa were extinct. Like the terror birds of Tertiary South America, moas were no match for invading mammals.

It's immediately obvious that this is a totally natural phenomenon: the natural history of life on Earth is really the story of new species driving old species extinct. Human-mediated extinction is really just a special case of a pervasive pattern. (It is even arguable that some of the first species modern humans drove extinct were their contemporary hominid relatives!) The problem, of course, lies with the fact that we're so much better at driving other species extinct than anything ever before -- well, except maybe for giant asteroids.

What of it? Well, natural history is also full of species that drove themselves extinct -- organisms that evolved, or invaded, and used up the available resources so quickly that they perished. Again, humans offer great case studies: Polynesians related to New Zealand's Maori people colonized almost every island in the South Pacific; and on many islands, they drove themselves locally extinct. They didn't make it. Sometimes, like on Easter Island, they almost went extinct, losing their entire culture and social organization in the process. Even the remarkable Maori, who so successfully adapted to New Zealand's challenges, found that their centuries-old social structures nearly collapsed with the sudden influx of new technology from Europe.

There's nothing that we've found in Nature's rulebook that says that successful species necessarily stay successful. In fact, in terms of persistence over evolutionary time, the species that seem to do the best are those that tread lightly: cockroaches, ants, mosses, and chitons have been around for much longer than their flashier, and more impactful, relatives.

I thought a lot about this today as a walked around downtown Auckland. Europeans haven't been here for all that long -- heck, even America seems old compared to this -- but already there are pieces that seem ancient against the backdrop of the city. Tucked under a bridge near the university district, for instance, there's an old graveyard predominantly from a brief period in the mid 1800's. Many of the headstones are already fallen over or broken, testament to the truly transient nature of our species's monuments.

Those headstones were also a reminder, as I walked through the wonderful Auckland Museum, of the unique opportunity we humans have to learn from the past. Much of the Museum is devoted to preserving and communicating the incredible cultural heritage of the Maori for future generations, and I think New Zealand's (comparatively) exemplary efforts to value and nurture its native culture represents one of our successes on that front. If we are to succeed as a species, we will need to save much, much more of our collective cultural and biological diversity to provision ourselves for an uncertain future.

And, of course, the way to do that is through our children. These two characters reminded me of that: evolution is simply the story of children doing things better than their parents. We would be well served to give our children the best opportunities possible for doing things better than we did.

Today was good. Perhaps for reasons unrelated to how the world is actually doing, I have hope.

Wednesday, October 31, 2007

A beautiful day in Auckland


It is a little hard for me to believe that I only just got here yesterday. Maybe that's due to the incredible hospitality of the Rainey family, or maybe it's the eerie, chimeric familiarity of the place; but when I realized today that it was Wednesday, and I got here on a Tuesday, the feeling was surreal.

Maybe it's the length of the days. I got up early this morning (as you might expect if you did a complicated bit of time zone math), so I've been going for a while. It was utterly clear and gorgeous, so I walked down the street to watch the sun come up over Hauraki Gulf.

It's quite a ways down to the water -- I think I dropped as much in elevation to the beach as I walked in distance from the house to the top of the stairs down. On the way, I was joined by an incredibly and aggressively personable little Siamese. Let it not be said that friendliness among Kiwis is limited to the humans. Quite to my surprise, the cat followed me all the way down the 200 or so stairs, and even came right out onto the beach.

Unfortunately for my camera-hogging little buddy, once we were actually on the beach I was quickly absorbed by taking lots of pictures of really boring things, like rocks and limpets and seaweed. Before long, Kitty had disappeared and I had only mollusks for company.

By the time I made it back to the house, Paul was up. We had a spot of coffee and were off to the lab, where he gave a really interesting talk on the evolution of multicellularity. This is quite a paradox given our current assumptions about how evolution works, and is an area of special interest to me. The fundamental problem is that, any time you have a group of organisms that trade a little personal benefit for the good of the whole, there is a tremendous incentive for cheaters to arise and reap the benefits without paying anything in to the pot. Since the cheaters end up gaining the most, they multiply the fastest and cooperation breaks down. This has been repeatedly demonstrated experimentally and even holds true to an extent in my old co-op!

So how do you maintain cooperation? Obviously it happens all the time; there are loads of symbiotic interactions in the natural world, and plenty of cooperation at higher levels of complexity (like co-ops). For multicellular organisms to happen in the first place, something had to have gotten past this stage about half a billion years ago (in fact, evidence points to at least a dozen independent origins of multicellularity). The fact that our current models of evolution have a hard time dealing with these things suggests that there's some room for improvement in the model, and this is largely the kind of question I hope to look at in my PhD thesis. It turns out that some of the bacterial systems that Paul uses for experimental evolution offer some unique and interesting ways to check this kind of thing out.

The key is that Paul's lab has a bacterial strain that, under certain conditions, will reliably evolve from free-living, independent cells to a cooperative mat of cells. Equally reliably, and with enough time, cheaters will evolve and eventually destroy the cooperative mat. Since the mat uses resources more efficiently than independent cells, it will re-evolve, and then re-collapse, and so on. Hopefully, by playing around with different evolutionary pressures, Paul's team will be able to discover important new things about how evolution plays out in these scenarios. Their data so far sure are fascinating.

And heck, maybe I'll be part of that team. Sure is a nice place, and good people (and cats)!

Monday, October 29, 2007

Actually in New Zealand

Here I am, actually in New Zealand. Pretty fantastic.

The flight was pretty much without a hitch. It's longish, but nothing too bad -- I even slept for a bit midway through. I was even lucky enough to have an empty seat next to me! Certainly made stretching out a bit easier. Customs was a breeze, and I got on board a shuttle to the North Shore lickety split. On the way up, I was treated to a spectacular sunrise over Manukau Harbour. I made good enough time to surprise my pajama'ed host, who was expecting me a bit later than 6:30...

After a breakfast with Paul and a bit of freshening up, we drove around a bit to see the sights. Auckland is an unbelievable city if you like the water; the various bays and inlets that section various bits of it up are constantly present and gorgeous. Fifty or so extinct volcanoes stick up here and there, going on 50km or so to the East. The effect is to take a body of water I normally think of as vast and monolithic (the Pacific Ocean) and section it up into something much more inviting. This place is kayak heaven.


Sightseeing out of the way, we went to the lab to sit down a bit. Massey University's main campus is at Palmerston North, which is only slightly less in the middle of nowhere than Palmerston South (if indeed there is such a place). Recognizing this, they have been expanding a satellite campus at Albany, in Auckland's North Shore. Things seem to be on the up and up, with a focus on growing their strength in biology and evolution. I think my most singular impression so far is of the architecture -- all the labs are little independent buildings, rather than the large, shared spaces I'm used to back in the states. It does give the campus a bit of a sleepy, residential feel. Kind of like if Hopkins were in Marin instead of Monterey, and had fewer people: really quiet little place right next to a largish city.

Jet lag hasn't been so bad, yet. However, it is only 4:30PM, and the prospect of staying awake for another five hours seems a bit daunting. This is shaping up to be a loooong day...

Sunday, October 28, 2007

Here we go...

Supposedly, in 24 hours I will be on the other side of the world. This still seems somewhat unbelievable. Even more unbelievable is the fact that I will be able to speak to people there in my native language. Thank you, 18th century imperial Europe.

My jumping off was made immeasurably more pleasurable by a stay with the good folks at CPX, a remarkable co-op full of remarkable people who together drive Palo Alto's awesomeness quotient through the roof. Pictured is the indomitable Wes, hands covered in what can only be described as a prelude to sheer terror. This probably won't make any sense to you if you've never tried to walk up the path to Synergy on the night of the Halloween party.

Well, off I go! I'll leave you with this remarkable fact courtesy of Wikipedia:

Zealand (Danish: Sjælland; [ˈɕɛˌlænˀ]) is the largest island (7,031 km²) of DenmarkGreenland, which is a Danish territory) and the 95th largest island of the world ... (excluding

In Norse mythology the island was created by the goddess Gefjun after she tricked Gylfi, the king of Sweden, as told in the story of Gylfaginning. She removed a piece of land and transported it to Denmark, and it became the island of Zealand. The vacant area was filled with water and became Mälaren.[2] However, since modern maps show a similarity between Zealand and the Swedish lake Vänern, it is sometimes identified as the hole left by Gefjun.

Tuesday, October 23, 2007

Premptive Travel Blogging

Looks like further exposition on the future of climate change lectures will have to wait until life stops intervening. From this point on, hoursbyhours becomes ---

a travel blog! *cymbal crash*

In fewer days than I care to think about, I'll be on a plane to storied New Zealand, where I will regale you, dear reader, with stories and pictures from extraordinarily far away. (It will be just like Bill Bryson's "Down Under," but less funny, eloquent, or lucrative.)

Until then -- and may then please wait for me to pack, thank you -- here's a picture to test out Blogger's image capabilities:

Away, bags, pack! Pack, I say!